Catalogue
Peer-reviewed publications
Works published in peer-reviewed scientific journals, with indexing databases listed. Every entry carries a DOI and/or eLibrary ID for independent verification.
Catalogue
Works published in peer-reviewed scientific journals, with indexing databases listed. Every entry carries a DOI and/or eLibrary ID for independent verification.
| Year | Publication | Level | DOI / eLib |
|---|---|---|---|
| 2026 | Application of Ring-Polyhedral Models of Amino Acids for Protein Structure Modeling Использование кольцегранных моделей аминокислот для моделирования структуры белков Kozhevnikov, D., Kushelev, A. · Molekulyarnaya Meditsina, vol. 24, no. 2, pp. 47–51 This paper addresses the theoretical prediction of protein spatial structure using ring-polyhedral models of amino acids. The shapes of serine and leucine are derived from the model, along with the geometry of the α-helix, in agreement with the established understanding of protein spatial organisation. The method enables prediction of protein spatial structure from a nucleotide coding sequence (CDS) without X-ray crystallography or spectroscopy. *(Draft EN adaptation — pending author review.)* РИНЦ · ВАК · Chemical Abstracts | LEVEL A — Experimental data | eLib zrikgz |
| 2025 | Modelling the Electron-Surface Shapes of Chemical Compounds with Various Covalent Bonds as Polyhedra Composed of Rings (Ring-Polyhedra) Моделирование форм электронных поверхностей химических соединений с различными ковалентными связями в виде полиэдров из колец (кольцегранников) Kozhevnikov, D., Kushelev, A. · Meditsina. Sotsiologiya. Filosofiya. Prikladnye Issledovaniya, no. 2, pp. 151–156 The paper provides a detailed account of the electronic structure and the algorithm for modelling molecules with covalent bonds as polyhedra composed of rings, illustrated on glycine (C₂H₅NO₂). Each ring corresponds numerically to the number of electrons on the outer atomic shell. *(Draft EN adaptation — pending author review.)* РИНЦ | LEVEL C — Hypothesis that motivated experiment | |
| 2025 | Determination of Protein Secondary Structure Using the Genetic Code Определение вторичной структуры белка с использованием генетического кода Kushelev, A. · Meditsina. Sotsiologiya. Filosofiya. Prikladnye Issledovaniya, no. 1, pp. 70–78 This paper describes an algorithm for predicting protein secondary structure from the nucleotide coding sequence based on a correspondence between the third nucleotide of the codon and the secondary-structure type. The approach forms the computational basis of the PicoFold web service. *(Draft EN adaptation — pending author review.)* РИНЦ | LEVEL A — Experimental data |
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